Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA11Q9Y5H2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA11Q9Y5H2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 NAPSB-206ENST00000562112 1266 ntBASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA11Q9Y5H2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 AC093827.2-201ENST00000512654 315 ntBASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGA11Q9Y5H2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 KRT18P23-201ENST00000435622 1283 ntBASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 TSPY15P-201ENST00000457163 923 ntBASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGA11Q9Y5H2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 AL512604.3-201ENST00000569583 964 ntBASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGA11Q9Y5H2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
PCDHGA11Q9Y5H2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PCDHGA11Q9Y5H2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGA11Q9Y5H2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms