Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 KRT8P3-201ENST00000519669 1449 ntBASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 MIR3180-5-201ENST00000583743 153 ntBASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA6Q9Y5G7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 MCCD1P1-208ENST00000445732 328 ntBASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA6Q9Y5G7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 AL121894.2-201ENST00000602977 491 ntBASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 NPAP1P7-201ENST00000613027 823 ntBASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA6Q9Y5G7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AC092597.1-201ENST00000487352 616 ntBASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms