Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB1Q9Y5F3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 AL162741.1-201ENST00000565563 1558 ntBASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 KRT8P50-201ENST00000562022 1438 ntBASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 SPDYE15P-201ENST00000424157 909 ntBASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB1Q9Y5F3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB1Q9Y5F3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 STARP1-201ENST00000397973 869 ntBASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB1Q9Y5F3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 BCL2-203ENST00000589955 5011 ntBASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 RNF165-205ENST00000588679 2904 ntBASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 ATP5G2P1-201ENST00000433580 426 ntBASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 KRT18P23-201ENST00000435622 1283 ntBASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 NEK4P2-201ENST00000580004 1012 ntBASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB1Q9Y5F3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms