Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 ANO7L1-203ENST00000602586 1720 ntBASIC19.12■□□□□ 0.65
YIPF1Q9Y548 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 AC096582.2-201ENST00000510860 516 ntBASIC19.12■□□□□ 0.65
YIPF1Q9Y548 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 AP002469.2-201ENST00000531724 424 ntBASIC19.12■□□□□ 0.65
YIPF1Q9Y548 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 AL121912.1-201ENST00000603683 238 ntBASIC19.12■□□□□ 0.65
YIPF1Q9Y548 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF1Q9Y548 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 LINC01126-201ENST00000623515 1646 ntBASIC19.11■□□□□ 0.65
YIPF1Q9Y548 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 POM121L3P-201ENST00000419331 1163 ntBASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 SAPCD2P3-201ENST00000455031 850 ntBASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 REXO1L6P-202ENST00000619970 1078 ntBASIC19.11■□□□□ 0.65
YIPF1Q9Y548 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.11■□□□□ 0.65
YIPF1Q9Y548 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 AC114341.1-201ENST00000618070 349 ntBASIC19.1■□□□□ 0.65
YIPF1Q9Y548 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.1■□□□□ 0.65
YIPF1Q9Y548 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 AC005082.1-201ENST00000413042 2259 ntBASIC19.09■□□□□ 0.65
YIPF1Q9Y548 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 LINC00602-201ENST00000629776 2065 ntBASIC19.09■□□□□ 0.65
YIPF1Q9Y548 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 AC068472.1-201ENST00000474589 881 ntBASIC19.09■□□□□ 0.65
YIPF1Q9Y548 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 AC005336.2-201ENST00000593183 939 ntBASIC19.09■□□□□ 0.65
YIPF1Q9Y548 AC009154.2-201ENST00000621177 724 ntBASIC19.09■□□□□ 0.65
YIPF1Q9Y548 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF1Q9Y548 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms