Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AP000593.1-201ENST00000393668 712 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AC008403.3-201ENST00000598924 454 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AC069544.1-201ENST00000609399 999 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 KRT17P3-201ENST00000420566 1262 ntBASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AC091390.4-202ENST00000476426 537 ntBASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 AL645608.8-201ENST00000606034 2086 ntBASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D4Q9Y2X8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 AC239809.2-201ENST00000415381 517 ntBASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 NIFKP9-201ENST00000419265 221 ntBASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 PHGDH-209ENST00000641074 1780 ntBASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.78□□□□□ -0.36
UBE2D4Q9Y2X8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms