Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 TPSP2-201ENST00000561760 610 ntBASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN1Q9UMX0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 RN7SL606P-201ENST00000472779 293 ntBASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 AL592071.1-201ENST00000611956 408 ntBASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 AC093503.3-201ENST00000624917 2352 ntBASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN1Q9UMX0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN1Q9UMX0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms