Protein–RNA interactions for Protein: Q9UIL8

PHF11, PHD finger protein 11, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11Q9UIL8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PHF11Q9UIL8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 AC009102.3-201ENST00000623118 1491 ntBASIC17.45■□□□□ 0.38
PHF11Q9UIL8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 SEC1P-202ENST00000473944 940 ntBASIC17.45■□□□□ 0.38
PHF11Q9UIL8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.45■□□□□ 0.38
PHF11Q9UIL8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHF11Q9UIL8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 BX664615.1-201ENST00000443558 458 ntBASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 COX11P1-201ENST00000489116 835 ntBASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AC140113.3-201ENST00000605663 199 ntBASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF11Q9UIL8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 AC005521.1-201ENST00000393351 872 ntBASIC17.43■□□□□ 0.38
PHF11Q9UIL8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
PHF11Q9UIL8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms