Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 AL109659.2-201ENST00000606809 1674 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 AC096733.2-201ENST00000609937 1394 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 FAM197Y1-201ENST00000421178 764 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 AC116562.2-201ENST00000507042 360 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 KRT18P41-201ENST00000518924 1277 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 CD177P1-201ENST00000606252 935 ntBASIC21.03■□□□□ 0.96
USP25Q9UHP3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
USP25Q9UHP3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP25Q9UHP3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP25Q9UHP3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.02■□□□□ 0.96
USP25Q9UHP3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
USP25Q9UHP3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.02■□□□□ 0.95
USP25Q9UHP3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.02■□□□□ 0.95
USP25Q9UHP3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
USP25Q9UHP3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 TSPY20P-201ENST00000450910 630 ntBASIC21.01■□□□□ 0.95
USP25Q9UHP3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP25Q9UHP3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
USP25Q9UHP3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms