Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 MYLKP1-201ENST00000509077 1580 ntBASIC17.11■□□□□ 0.33
RLIMQ9NVW2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 MIR718-201ENST00000390190 70 ntBASIC17.11■□□□□ 0.33
RLIMQ9NVW2 MCCD1P1-208ENST00000445732 328 ntBASIC17.11■□□□□ 0.33
RLIMQ9NVW2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RLIMQ9NVW2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 MIR564-202ENST00000385049 94 ntBASIC17.1■□□□□ 0.33
RLIMQ9NVW2 RBM17P1-201ENST00000453646 1190 ntBASIC17.1■□□□□ 0.33
RLIMQ9NVW2 CA15P1-201ENST00000481698 905 ntBASIC17.1■□□□□ 0.33
RLIMQ9NVW2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 MIR4674-201ENST00000582457 87 ntBASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RLIMQ9NVW2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
RLIMQ9NVW2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms