Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB16Q9NRJ7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 KRT8P11-201ENST00000409686 1436 ntBASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB16Q9NRJ7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.96■□□□□ 0.14
PCDHB16Q9NRJ7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
PCDHB16Q9NRJ7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB16Q9NRJ7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 AC004951.3-201ENST00000418645 1148 ntBASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 AC006058.3-201ENST00000606217 1069 ntBASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB16Q9NRJ7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB16Q9NRJ7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms