Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRDM9Q9NQV7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRDM9Q9NQV7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 GMCL1P1-201ENST00000463439 1581 ntBASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 Z99916.3-201ENST00000623422 1080 ntBASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 AC135050.7-201ENST00000624508 2218 ntBASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PRDM9Q9NQV7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 LINC01311-201ENST00000565162 1445 ntBASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 AL031133.1-201ENST00000406807 723 ntBASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 HYMAI.1-201ENST00000620949 238 ntBASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRDM9Q9NQV7 LETM1P2-201ENST00000597330 2178 ntBASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms