Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
VTA1Q9NP79 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 AL590627.1-203ENST00000421194 1026 ntBASIC20.48■□□□□ 0.87
VTA1Q9NP79 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.48■□□□□ 0.87
VTA1Q9NP79 MTCL1P1-201ENST00000446207 792 ntBASIC20.48■□□□□ 0.87
VTA1Q9NP79 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 AC009533.2-201ENST00000543664 586 ntBASIC20.48■□□□□ 0.87
VTA1Q9NP79 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.48■□□□□ 0.87
VTA1Q9NP79 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.48■□□□□ 0.87
VTA1Q9NP79 AC008608.2-201ENST00000606089 416 ntBASIC20.48■□□□□ 0.87
VTA1Q9NP79 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.48■□□□□ 0.87
VTA1Q9NP79 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.48■□□□□ 0.87
VTA1Q9NP79 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTA1Q9NP79 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.47■□□□□ 0.87
VTA1Q9NP79 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTA1Q9NP79 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 AF186996.4-201ENST00000467186 377 ntBASIC20.46■□□□□ 0.87
VTA1Q9NP79 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 AL138831.2-201ENST00000606564 490 ntBASIC20.46■□□□□ 0.87
VTA1Q9NP79 AC023511.2-201ENST00000618803 211 ntBASIC20.46■□□□□ 0.87
VTA1Q9NP79 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTA1Q9NP79 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
VTA1Q9NP79 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
VTA1Q9NP79 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.45■□□□□ 0.87
VTA1Q9NP79 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 AC073130.3-201ENST00000624389 2278 ntBASIC20.45■□□□□ 0.86
VTA1Q9NP79 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 RBM17P3-201ENST00000417687 1192 ntBASIC20.45■□□□□ 0.86
VTA1Q9NP79 AL031284.1-201ENST00000419297 478 ntBASIC20.45■□□□□ 0.86
VTA1Q9NP79 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTA1Q9NP79 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 AL355877.3-201ENST00000622820 899 ntBASIC20.45■□□□□ 0.86
VTA1Q9NP79 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VTA1Q9NP79 LINC00602-201ENST00000629776 2065 ntBASIC20.45■□□□□ 0.86
VTA1Q9NP79 LINC01126-201ENST00000623515 1646 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms