Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 TPM4P1-201ENST00000436100 807 ntBASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 SDHAP2-201ENST00000455183 2001 ntBASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AC099343.3-201ENST00000605834 2503 ntBASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 BX276092.5-203ENST00000456199 560 ntBASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AL121672.3-201ENST00000608644 468 ntBASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AL691432.3-201ENST00000621860 400 ntBASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 AC012313.10-201ENST00000623509 926 ntBASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0A4Q9HBG4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 TSSC2-201ENST00000450217 709 ntBASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V0A4Q9HBG4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 AC092329.2-201ENST00000598402 547 ntBASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 AC024563.2-201ENST00000603282 481 ntBASIC20.33■□□□□ 0.85
ATP6V0A4Q9HBG4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0A4Q9HBG4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ATP6V0A4Q9HBG4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A4Q9HBG4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A4Q9HBG4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP6V0A4Q9HBG4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0A4Q9HBG4 AC126763.1-201ENST00000552015 2118 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms