Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC092329.2-201ENST00000598402 547 ntBASIC19.82■□□□□ 0.76
CDT1Q9H211 AL592071.1-201ENST00000611956 408 ntBASIC19.82■□□□□ 0.76
CDT1Q9H211 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDT1Q9H211 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDT1Q9H211 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDT1Q9H211 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDT1Q9H211 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.82■□□□□ 0.76
CDT1Q9H211 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDT1Q9H211 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.81■□□□□ 0.76
CDT1Q9H211 RN7SL606P-201ENST00000472779 293 ntBASIC19.81■□□□□ 0.76
CDT1Q9H211 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.81■□□□□ 0.76
CDT1Q9H211 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CDT1Q9H211 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.81■□□□□ 0.76
CDT1Q9H211 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CDT1Q9H211 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDT1Q9H211 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.8■□□□□ 0.76
CDT1Q9H211 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDT1Q9H211 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDT1Q9H211 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.8■□□□□ 0.76
CDT1Q9H211 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 DRAXINP1-201ENST00000437611 948 ntBASIC19.8■□□□□ 0.76
CDT1Q9H211 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.8■□□□□ 0.76
CDT1Q9H211 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.8■□□□□ 0.76
CDT1Q9H211 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 IGHV3-41-201ENST00000613121 348 ntBASIC19.8■□□□□ 0.76
CDT1Q9H211 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDT1Q9H211 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDT1Q9H211 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDT1Q9H211 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.8■□□□□ 0.76
CDT1Q9H211 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDT1Q9H211 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.79■□□□□ 0.76
CDT1Q9H211 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.79■□□□□ 0.76
CDT1Q9H211 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.79■□□□□ 0.76
CDT1Q9H211 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDT1Q9H211 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
CDT1Q9H211 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.79■□□□□ 0.76
CDT1Q9H211 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 LINC00167-201ENST00000530583 1419 ntBASIC19.78■□□□□ 0.76
CDT1Q9H211 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDT1Q9H211 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDT1Q9H211 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CDT1Q9H211 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.78■□□□□ 0.76
CDT1Q9H211 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.78■□□□□ 0.76
CDT1Q9H211 TOB2P1-201ENST00000469761 992 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms