Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC010947.1-201ENST00000623454 693 ntBASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
FOXP3Q9BZS1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 RCC2P3-201ENST00000418112 1537 ntBASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 AP000593.1-201ENST00000393668 712 ntBASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 AC113347.1-201ENST00000413321 391 ntBASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXP3Q9BZS1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 AC004980.1-204ENST00000429707 299 ntBASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 AL031985.4-201ENST00000642138 673 ntBASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 AL109659.2-201ENST00000606809 1674 ntBASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXP3Q9BZS1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 KRT18P22-201ENST00000402024 1347 ntBASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms