Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 GABARAPL3-202ENST00000624044 1851 ntBASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 MRPL20P1-201ENST00000400819 433 ntBASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AC087641.1-201ENST00000557561 1021 ntBASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AC105339.3-201ENST00000560043 636 ntBASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 AL139400.1-201ENST00000366220 510 ntBASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 MCCD1P1-208ENST00000445732 328 ntBASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 CEND1P1-201ENST00000451006 455 ntBASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 C20orf181-201ENST00000623918 480 ntBASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 AL049796.1-201ENST00000565336 1766 ntBASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CNTNAP3Q9BZ76 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 AJ011932.1-201ENST00000621707 465 ntBASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP3Q9BZ76 AL353692.3-201ENST00000407031 1396 ntBASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms