Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KRT19P1-201ENST00000405746 1186 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 SERPINA7P1-201ENST00000443077 631 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AF213884.3-201ENST00000563833 479 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 C2orf69P4-201ENST00000565394 541 ntBASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC4.95□□□□□ -1.62
LCE3DQ9BYE3 AC106739.1-201ENST00000617035 715 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms