Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 HOXB1-202ENST00000577092 1414 ntBASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 CA15P1-201ENST00000481698 905 ntBASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BPIFA3Q9BQP9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.28■□□□□ 0.84
BPIFA3Q9BQP9 LINC01126-201ENST00000623515 1646 ntBASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 PCDHA12-202ENST00000613593 2588 ntBASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 MIR935-201ENST00000401179 91 ntBASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 HLA-L-209ENST00000420110 1011 ntBASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 DGCR10-201ENST00000609839 495 ntBASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BPIFA3Q9BQP9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 AL023806.1-201ENST00000603994 1649 ntBASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BPIFA3Q9BQP9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BPIFA3Q9BQP9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms