Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.2■□□□□ 0.66
SMOQ99835 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SMOQ99835 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 CHCHD2P8-201ENST00000429873 447 ntBASIC19.2■□□□□ 0.66
SMOQ99835 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
SMOQ99835 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.2■□□□□ 0.66
SMOQ99835 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.2■□□□□ 0.66
SMOQ99835 MIR3180-1-201ENST00000580374 94 ntBASIC19.2■□□□□ 0.66
SMOQ99835 MIR3180-3-201ENST00000584616 94 ntBASIC19.2■□□□□ 0.66
SMOQ99835 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
SMOQ99835 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.2■□□□□ 0.66
SMOQ99835 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
SMOQ99835 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.2■□□□□ 0.66
SMOQ99835 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
SMOQ99835 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.19■□□□□ 0.66
SMOQ99835 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
SMOQ99835 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 AC008687.5-201ENST00000593746 558 ntBASIC19.19■□□□□ 0.66
SMOQ99835 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.19■□□□□ 0.66
SMOQ99835 AC092119.3-201ENST00000612618 583 ntBASIC19.19■□□□□ 0.66
SMOQ99835 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.19■□□□□ 0.66
SMOQ99835 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SMOQ99835 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMOQ99835 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SMOQ99835 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
SMOQ99835 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMOQ99835 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SMOQ99835 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.18■□□□□ 0.66
SMOQ99835 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.18■□□□□ 0.66
SMOQ99835 AP002414.4-201ENST00000589764 1148 ntBASIC19.18■□□□□ 0.66
SMOQ99835 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
SMOQ99835 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMOQ99835 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.17■□□□□ 0.66
SMOQ99835 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMOQ99835 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.17■□□□□ 0.66
SMOQ99835 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.17■□□□□ 0.66
SMOQ99835 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.17■□□□□ 0.66
SMOQ99835 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMOQ99835 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMOQ99835 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
SMOQ99835 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMOQ99835 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMOQ99835 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms