Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC6Q99741 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC6Q99741 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC6Q99741 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDC6Q99741 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 AL163051.1-201ENST00000569214 1512 ntBASIC17.67■□□□□ 0.42
CDC6Q99741 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC6Q99741 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CDC6Q99741 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CDC6Q99741 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.67■□□□□ 0.42
CDC6Q99741 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC6Q99741 AL591424.1-201ENST00000442569 1213 ntBASIC17.67■□□□□ 0.42
CDC6Q99741 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.67■□□□□ 0.42
CDC6Q99741 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC6Q99741 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC6Q99741 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CDC6Q99741 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC6Q99741 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC6Q99741 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CDC6Q99741 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC6Q99741 HNRNPDP1-201ENST00000439535 754 ntBASIC17.66■□□□□ 0.42
CDC6Q99741 KRT18P41-201ENST00000518924 1277 ntBASIC17.66■□□□□ 0.42
CDC6Q99741 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.66■□□□□ 0.42
CDC6Q99741 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 FAM197Y3-203ENST00000618346 717 ntBASIC17.66■□□□□ 0.42
CDC6Q99741 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDC6Q99741 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC6Q99741 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC6Q99741 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC6Q99741 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.65■□□□□ 0.42
CDC6Q99741 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC6Q99741 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDC6Q99741 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC6Q99741 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CDC6Q99741 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDC6Q99741 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDC6Q99741 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDC6Q99741 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.64■□□□□ 0.41
CDC6Q99741 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC6Q99741 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms