Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF558Q96NG5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.45■□□□□ 0.7
ZNF558Q96NG5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 RBM17P3-201ENST00000417687 1192 ntBASIC19.45■□□□□ 0.7
ZNF558Q96NG5 SLC25A1P1-201ENST00000528351 927 ntBASIC19.45■□□□□ 0.7
ZNF558Q96NG5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 AL049812.1-201ENST00000432563 2267 ntBASIC19.45■□□□□ 0.7
ZNF558Q96NG5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF558Q96NG5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 MTCL1P1-201ENST00000446207 792 ntBASIC19.44■□□□□ 0.7
ZNF558Q96NG5 AC018712.1-201ENST00000455767 687 ntBASIC19.44■□□□□ 0.7
ZNF558Q96NG5 RNPS1P1-201ENST00000507437 918 ntBASIC19.44■□□□□ 0.7
ZNF558Q96NG5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF558Q96NG5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 FGFR3P6-201ENST00000457012 610 ntBASIC19.43■□□□□ 0.7
ZNF558Q96NG5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 MTDHP3-201ENST00000594186 672 ntBASIC19.43■□□□□ 0.7
ZNF558Q96NG5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.43■□□□□ 0.7
ZNF558Q96NG5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF558Q96NG5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 SCARNA2-201ENST00000458748 420 ntBASIC19.42■□□□□ 0.7
ZNF558Q96NG5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF558Q96NG5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms