Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 C1QL1P1-201ENST00000568105 661 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 AC022517.1-201ENST00000592429 346 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 AC008687.6-201ENST00000596318 630 ntBASIC14.03□□□□□ -0.16
LINC00479Q96M42 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00479Q96M42 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LINC00479Q96M42 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
LINC00479Q96M42 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC00479Q96M42 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00479Q96M42 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC00479Q96M42 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00479Q96M42 KRT8P11-201ENST00000409686 1436 ntBASIC14.02□□□□□ -0.16
LINC00479Q96M42 KRT8P3-201ENST00000519669 1449 ntBASIC14.02□□□□□ -0.16
LINC00479Q96M42 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 AC060766.5-201ENST00000590539 871 ntBASIC14.02□□□□□ -0.17
LINC00479Q96M42 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 AL121832.2-201ENST00000610979 668 ntBASIC14.02□□□□□ -0.17
LINC00479Q96M42 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.02□□□□□ -0.17
LINC00479Q96M42 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00479Q96M42 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00479Q96M42 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 AC097658.1-201ENST00000475555 843 ntBASIC14.01□□□□□ -0.17
LINC00479Q96M42 AC083906.2-201ENST00000511578 360 ntBASIC14.01□□□□□ -0.17
LINC00479Q96M42 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms