Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP3Q96JB5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.7■□□□□ 0.91
CDK5RAP3Q96JB5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDK5RAP3Q96JB5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.7■□□□□ 0.91
CDK5RAP3Q96JB5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC009102.3-201ENST00000623118 1491 ntBASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 MIR149-201ENST00000384879 89 ntBASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC010203.1-204ENST00000548782 407 ntBASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP3Q96JB5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 AC010240.3-201ENST00000607688 395 ntBASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP3Q96JB5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP3Q96JB5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms