Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 PHGDH-209ENST00000641074 1780 ntBASIC16.5■□□□□ 0.23
PTP4A1Q93096 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 KRT8P50-201ENST00000562022 1438 ntBASIC16.5■□□□□ 0.23
PTP4A1Q93096 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 GMCL1P1-201ENST00000463439 1581 ntBASIC16.5■□□□□ 0.23
PTP4A1Q93096 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC139713.2-201ENST00000641328 2723 ntBASIC16.49■□□□□ 0.23
PTP4A1Q93096 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC099398.1-201ENST00000567919 2776 ntBASIC16.49■□□□□ 0.23
PTP4A1Q93096 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC099343.3-201ENST00000605834 2503 ntBASIC16.49■□□□□ 0.23
PTP4A1Q93096 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A1Q93096 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTP4A1Q93096 AC034236.2-201ENST00000606662 1610 ntBASIC16.48■□□□□ 0.23
PTP4A1Q93096 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 AC113410.3-201ENST00000623366 203 ntBASIC16.48■□□□□ 0.23
PTP4A1Q93096 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 AC096733.2-201ENST00000609937 1394 ntBASIC16.48■□□□□ 0.23
PTP4A1Q93096 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 TNRC18P3-201ENST00000441896 2691 ntBASIC16.48■□□□□ 0.23
PTP4A1Q93096 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTP4A1Q93096 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTP4A1Q93096 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 AC012313.1-201ENST00000593393 3059 ntBASIC16.47■□□□□ 0.23
PTP4A1Q93096 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 PRORSD1P-202ENST00000563365 2154 ntBASIC16.47■□□□□ 0.23
PTP4A1Q93096 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTP4A1Q93096 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTP4A1Q93096 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms