Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
BEST4Q8NFU0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 AC026271.2-201ENST00000428091 497 ntBASIC15.86■□□□□ 0.13
BEST4Q8NFU0 SLC25A6P5-201ENST00000435663 894 ntBASIC15.86■□□□□ 0.13
BEST4Q8NFU0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 AC080038.1-201ENST00000611274 1154 ntBASIC15.86■□□□□ 0.13
BEST4Q8NFU0 AC073111.5-205ENST00000641717 521 ntBASIC15.86■□□□□ 0.13
BEST4Q8NFU0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 UBALD1-205ENST00000590891 2641 ntBASIC15.86■□□□□ 0.13
BEST4Q8NFU0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST4Q8NFU0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 MIR663A-201ENST00000385250 93 ntBASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TSPY23P-201ENST00000440136 739 ntBASIC15.85■□□□□ 0.13
BEST4Q8NFU0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AL162430.1-201ENST00000480705 870 ntBASIC15.85■□□□□ 0.13
BEST4Q8NFU0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AC092118.2-201ENST00000613495 667 ntBASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 HEIH-201ENST00000623091 1652 ntBASIC15.85■□□□□ 0.13
BEST4Q8NFU0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST4Q8NFU0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST4Q8NFU0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms