Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 NUS1P2-201ENST00000417358 873 ntBASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 AC092183.1-201ENST00000469884 875 ntBASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 AF238378.1-201ENST00000526806 358 ntBASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 AC104390.1-201ENST00000555663 520 ntBASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 AL592071.1-201ENST00000611956 408 ntBASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF248Q8NDW4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 FAM197Y8-203ENST00000450145 560 ntBASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 AC124864.1-201ENST00000623408 392 ntBASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF248Q8NDW4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 AC007952.6-201ENST00000573168 2673 ntBASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 AC003957.1-201ENST00000625108 2673 ntBASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF248Q8NDW4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 AF186996.4-201ENST00000467186 377 ntBASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 RNPS1P1-201ENST00000507437 918 ntBASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 RNA5SP419-201ENST00000515908 135 ntBASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF248Q8NDW4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms