Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC069148.1-201ENST00000608741 768 ntBASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 ESPNP-201ENST00000270691 2015 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 MIR3180-1-201ENST00000580374 94 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 MIR3180-3-201ENST00000584616 94 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 AC008687.5-201ENST00000593746 558 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARHGEF39Q8N4T4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 TSSC2-201ENST00000450217 709 ntBASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 AL121672.3-201ENST00000608644 468 ntBASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 AC004263.2-201ENST00000617183 678 ntBASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ARHGEF39Q8N4T4 LINC00167-201ENST00000530583 1419 ntBASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 AL353692.3-201ENST00000407031 1396 ntBASIC17.27■□□□□ 0.35
ARHGEF39Q8N4T4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 RN7SL606P-201ENST00000472779 293 ntBASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ARHGEF39Q8N4T4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
ARHGEF39Q8N4T4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms