Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 AP002982.1-201ENST00000492365 877 ntBASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 AC135776.1-201ENST00000319817 2481 ntBASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEPDC4Q8N2C3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEPDC4Q8N2C3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DEPDC4Q8N2C3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 TSPY23P-201ENST00000440136 739 ntBASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 AC138028.4-201ENST00000564984 1845 ntBASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.07■□□□□ 0.32
DEPDC4Q8N2C3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DEPDC4Q8N2C3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
DEPDC4Q8N2C3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEPDC4Q8N2C3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms