Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.72■□□□□ 0.43
KRT78Q8N1N4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC005363.2-201ENST00000618631 242 ntBASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC141257.4-201ENST00000634557 245 ntBASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC136944.6-201ENST00000634818 245 ntBASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AC097493.4-201ENST00000641197 219 ntBASIC17.72■□□□□ 0.43
KRT78Q8N1N4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT78Q8N1N4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 AC024243.1-201ENST00000609234 778 ntBASIC17.71■□□□□ 0.43
KRT78Q8N1N4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT78Q8N1N4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KRT78Q8N1N4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
KRT78Q8N1N4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.71■□□□□ 0.42
KRT78Q8N1N4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KRT78Q8N1N4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AC010240.3-201ENST00000607688 395 ntBASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AC012306.2-201ENST00000609350 630 ntBASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AC092865.7-201ENST00000641832 219 ntBASIC17.7■□□□□ 0.42
KRT78Q8N1N4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
KRT78Q8N1N4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms