Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 MTDHP5-201ENST00000598980 586 ntBASIC27.05■■□□□ 1.92
ABCA6Q8N139 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
ABCA6Q8N139 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ABCA6Q8N139 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ABCA6Q8N139 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ABCA6Q8N139 HTR5BP-201ENST00000430851 1154 ntBASIC27.04■■□□□ 1.92
ABCA6Q8N139 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
ABCA6Q8N139 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.04■■□□□ 1.92
ABCA6Q8N139 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ABCA6Q8N139 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 AC099343.3-201ENST00000605834 2503 ntBASIC27.03■■□□□ 1.92
ABCA6Q8N139 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ABCA6Q8N139 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ABCA6Q8N139 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 AL596442.2-201ENST00000610240 980 ntBASIC27.03■■□□□ 1.92
ABCA6Q8N139 AC073592.4-201ENST00000623827 446 ntBASIC27.03■■□□□ 1.92
ABCA6Q8N139 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ABCA6Q8N139 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.03■■□□□ 1.92
ABCA6Q8N139 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ABCA6Q8N139 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ABCA6Q8N139 KRT18P65-201ENST00000439811 1286 ntBASIC27.02■■□□□ 1.92
ABCA6Q8N139 BX005266.1-201ENST00000473402 457 ntBASIC27.02■■□□□ 1.92
ABCA6Q8N139 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ABCA6Q8N139 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ABCA6Q8N139 POLI-202ENST00000406285 2030 ntTSL 2 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC27.02■■□□□ 1.92
ABCA6Q8N139 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ABCA6Q8N139 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.01■■□□□ 1.92
ABCA6Q8N139 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
ABCA6Q8N139 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC27.01■■□□□ 1.92
ABCA6Q8N139 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.01■■□□□ 1.92
ABCA6Q8N139 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.92
ABCA6Q8N139 AP000867.4-201ENST00000641616 219 ntBASIC27.01■■□□□ 1.92
ABCA6Q8N139 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
ABCA6Q8N139 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 KRT18P28-201ENST00000453838 1332 ntBASIC27.01■■□□□ 1.91
ABCA6Q8N139 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ABCA6Q8N139 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 ELK2BP-201ENST00000415014 1224 ntBASIC27.01■■□□□ 1.91
ABCA6Q8N139 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC27.01■■□□□ 1.91
ABCA6Q8N139 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC27■■□□□ 1.91
ABCA6Q8N139 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC27■■□□□ 1.91
ABCA6Q8N139 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC27■■□□□ 1.91
ABCA6Q8N139 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 AC254562.1-201ENST00000417586 456 ntBASIC27■■□□□ 1.91
ABCA6Q8N139 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27■■□□□ 1.91
ABCA6Q8N139 AC007967.3-201ENST00000434308 558 ntBASIC27■■□□□ 1.91
ABCA6Q8N139 KRT18P2-201ENST00000447938 1258 ntBASIC27■■□□□ 1.91
ABCA6Q8N139 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27■■□□□ 1.91
ABCA6Q8N139 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC27■■□□□ 1.91
ABCA6Q8N139 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms