Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 FAM197Y3-203ENST00000618346 717 ntBASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 PCDHAC2-203ENST00000615316 3011 ntBASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AC092910.1-201ENST00000482027 1129 ntBASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AC093909.1-201ENST00000504731 1122 ntBASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 KRT8P47-201ENST00000604727 1398 ntBASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 RPSAP43-201ENST00000402237 625 ntBASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 KRT18P65-201ENST00000439811 1286 ntBASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 AC092183.1-201ENST00000469884 875 ntBASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 MTDHP4-201ENST00000600287 670 ntBASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.21■□□□□ 0.35
COL27A1Q8IZC6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL27A1Q8IZC6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COL27A1Q8IZC6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 MED15P5-201ENST00000423150 992 ntBASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AC007967.2-201ENST00000432613 625 ntBASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AC008687.5-201ENST00000593746 558 ntBASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AL356488.2-201ENST00000602755 427 ntBASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 AC079776.2-201ENST00000641154 1609 ntBASIC17.2■□□□□ 0.34
COL27A1Q8IZC6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AC104109.2-201ENST00000602919 1418 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AL356309.3-201ENST00000624132 1934 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 UPF3AP3-201ENST00000420996 769 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AC005104.2-201ENST00000427818 678 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AC007967.3-201ENST00000434308 558 ntBASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
COL27A1Q8IZC6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms