Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 AC106730.1-201ENST00000566722 1090 ntBASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 AL049840.3-201ENST00000602669 611 ntBASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEFF1Q8IYR6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 AL032819.2-201ENST00000624543 2162 ntBASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 RCN1P2-201ENST00000398357 915 ntBASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 RNPS1P1-201ENST00000507437 918 ntBASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 HEIH-201ENST00000623091 1652 ntBASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEFF1Q8IYR6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 RPL13AP23-201ENST00000480739 586 ntBASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 TERC-201ENST00000602385 541 ntBASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEFF1Q8IYR6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEFF1Q8IYR6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms