Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 AC135776.1-201ENST00000319817 2481 ntBASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC50Q8IVM0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC50Q8IVM0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC50Q8IVM0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC50Q8IVM0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC50Q8IVM0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 PRORSD1P-201ENST00000295112 541 ntBASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 AL158047.1-201ENST00000445918 881 ntBASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 AL109659.2-201ENST00000606809 1674 ntBASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
CCDC50Q8IVM0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 MYLKP1-201ENST00000509077 1580 ntBASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 AC008622.2-201ENST00000617006 1229 ntBASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC50Q8IVM0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC50Q8IVM0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC50Q8IVM0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms