Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CROCCP3Q8IVE0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 SUDS3P1-201ENST00000505831 966 ntBASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 FLJ13224-201ENST00000313737 1514 ntBASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CROCCP3Q8IVE0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CROCCP3Q8IVE0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.64■□□□□ 0.26
CROCCP3Q8IVE0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.64■□□□□ 0.26
CROCCP3Q8IVE0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.64■□□□□ 0.26
CROCCP3Q8IVE0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CROCCP3Q8IVE0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CROCCP3Q8IVE0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 C2orf69P4-201ENST00000565394 541 ntBASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms