Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 AC091390.4-202ENST00000476426 537 ntBASIC17.21■□□□□ 0.35
CCDC71Q8IV32 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 AC116562.4-202ENST00000641738 218 ntBASIC17.21■□□□□ 0.35
CCDC71Q8IV32 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.21■□□□□ 0.35
CCDC71Q8IV32 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC71Q8IV32 AC135776.1-201ENST00000319817 2481 ntBASIC17.21■□□□□ 0.34
CCDC71Q8IV32 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC71Q8IV32 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 AC134043.2-201ENST00000624206 2238 ntBASIC17.2■□□□□ 0.34
CCDC71Q8IV32 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 HMGA1P5-201ENST00000412453 271 ntBASIC17.2■□□□□ 0.34
CCDC71Q8IV32 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC71Q8IV32 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CCR12P-201ENST00000446203 998 ntBASIC17.19■□□□□ 0.34
CCDC71Q8IV32 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC71Q8IV32 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.18■□□□□ 0.34
CCDC71Q8IV32 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AC096733.2-201ENST00000609937 1394 ntBASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC71Q8IV32 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
CCDC71Q8IV32 Z85996.1-201ENST00000494644 937 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms