Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE8Q86YQ8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE8Q86YQ8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE8Q86YQ8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 AC009102.3-201ENST00000623118 1491 ntBASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE8Q86YQ8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 MIR149-201ENST00000384879 89 ntBASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 BX088651.1-201ENST00000540551 451 ntBASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 AC116562.4-202ENST00000641738 218 ntBASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 AC012317.2-201ENST00000623305 2251 ntBASIC19.21■□□□□ 0.67
CPNE8Q86YQ8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 ECEL1P2-202ENST00000465689 757 ntBASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 FAM87A-204ENST00000613235 858 ntBASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 AL024508.2-201ENST00000607749 1894 ntBASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CPNE8Q86YQ8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 LINC00896-202ENST00000609602 2128 ntBASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE8Q86YQ8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms