Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 AL136379.1-201ENST00000623471 2642 ntBASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 AC008550.1-201ENST00000511500 884 ntBASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 AC233702.5-201ENST00000584107 538 ntBASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM53Q6P2H8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 FAM197Y1-201ENST00000421178 764 ntBASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 AC026271.3-201ENST00000571884 352 ntBASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 CD177P1-201ENST00000606252 935 ntBASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 AL049637.2-201ENST00000641778 930 ntBASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM53Q6P2H8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms