Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 AC211429.1-201ENST00000415277 523 ntBASIC16.87■□□□□ 0.29
ZNF544Q6NX49 NUDT16P1-203ENST00000513809 620 ntBASIC16.87■□□□□ 0.29
ZNF544Q6NX49 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 C1QL1P1-201ENST00000568105 661 ntBASIC16.87■□□□□ 0.29
ZNF544Q6NX49 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 AC011270.2-201ENST00000624293 2550 ntBASIC16.87■□□□□ 0.29
ZNF544Q6NX49 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF544Q6NX49 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.87■□□□□ 0.29
ZNF544Q6NX49 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 TUBB8P6-201ENST00000436895 1288 ntBASIC16.86■□□□□ 0.29
ZNF544Q6NX49 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 AC084018.2-201ENST00000613093 2607 ntBASIC16.86■□□□□ 0.29
ZNF544Q6NX49 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 KRT16P1-201ENST00000399124 1418 ntBASIC16.86■□□□□ 0.29
ZNF544Q6NX49 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 ABALON-201ENST00000629058 1903 ntBASIC16.86■□□□□ 0.29
ZNF544Q6NX49 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF544Q6NX49 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 ECEL1P3-201ENST00000427961 737 ntBASIC16.85■□□□□ 0.29
ZNF544Q6NX49 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 KRT18P16-201ENST00000510337 1294 ntBASIC16.85■□□□□ 0.29
ZNF544Q6NX49 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms