Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.84■□□□□ 0.61
ALFQ53S48 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.84■□□□□ 0.61
ALFQ53S48 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.84■□□□□ 0.61
ALFQ53S48 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.84■□□□□ 0.61
ALFQ53S48 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.84■□□□□ 0.61
ALFQ53S48 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.84■□□□□ 0.61
ALFQ53S48 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 LINC01126-201ENST00000623515 1646 ntBASIC18.84■□□□□ 0.61
ALFQ53S48 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.84■□□□□ 0.61
ALFQ53S48 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALFQ53S48 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.83■□□□□ 0.61
ALFQ53S48 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.61
ALFQ53S48 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ALFQ53S48 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ALFQ53S48 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALFQ53S48 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.83■□□□□ 0.61
ALFQ53S48 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
ALFQ53S48 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ALFQ53S48 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ALFQ53S48 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
ALFQ53S48 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 AL645929.1-201ENST00000420084 975 ntBASIC18.83■□□□□ 0.6
ALFQ53S48 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.83■□□□□ 0.6
ALFQ53S48 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.83■□□□□ 0.6
ALFQ53S48 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
ALFQ53S48 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ALFQ53S48 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.83■□□□□ 0.6
ALFQ53S48 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.83■□□□□ 0.6
ALFQ53S48 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ALFQ53S48 AL162741.1-201ENST00000565563 1558 ntBASIC18.83■□□□□ 0.6
ALFQ53S48 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.83■□□□□ 0.6
ALFQ53S48 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALFQ53S48 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 AC009113.1-201ENST00000570267 2443 ntBASIC18.82■□□□□ 0.6
ALFQ53S48 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ALFQ53S48 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ALFQ53S48 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.82■□□□□ 0.6
ALFQ53S48 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.82■□□□□ 0.6
ALFQ53S48 AC116407.4-201ENST00000623319 1061 ntBASIC18.82■□□□□ 0.6
ALFQ53S48 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ALFQ53S48 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
ALFQ53S48 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.82■□□□□ 0.6
ALFQ53S48 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.82■□□□□ 0.6
ALFQ53S48 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALFQ53S48 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.81■□□□□ 0.6
ALFQ53S48 RNF126P1-202ENST00000569893 925 ntBASIC18.81■□□□□ 0.6
ALFQ53S48 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 AC024563.2-201ENST00000603282 481 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms