Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 AC012306.2-201ENST00000609350 630 ntBASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF3Q3KNV8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 AC012313.1-201ENST00000593393 3059 ntBASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 TSPY14P-201ENST00000303979 915 ntBASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF3Q3KNV8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.27■□□□□ 0.19
PCGF3Q3KNV8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 CA15P1-201ENST00000481698 905 ntBASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 CKBP1-201ENST00000565489 1086 ntBASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 KRT8P9-201ENST00000558927 1449 ntBASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
PCGF3Q3KNV8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCGF3Q3KNV8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.25■□□□□ 0.19
PCGF3Q3KNV8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCGF3Q3KNV8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCGF3Q3KNV8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.25■□□□□ 0.19
PCGF3Q3KNV8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms