Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 AC117500.6-201ENST00000624871 588 ntBASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 HNRNPDP1-201ENST00000439535 754 ntBASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 AL138831.2-201ENST00000606564 490 ntBASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 AP001269.4-201ENST00000609611 512 ntBASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 MYLKP1-201ENST00000509077 1580 ntBASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM71Q2Q1W2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 RBM17P3-201ENST00000417687 1192 ntBASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 AC106730.1-201ENST00000566722 1090 ntBASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 AC139530.3-201ENST00000620344 690 ntBASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 FAM215A-202ENST00000632077 792 ntBASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 INTS4P1-201ENST00000438455 1935 ntBASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM71Q2Q1W2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 MTCL1P1-201ENST00000446207 792 ntBASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 AC009154.2-201ENST00000621177 724 ntBASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM71Q2Q1W2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM71Q2Q1W2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms