Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 YBX2P1-201ENST00000394192 760 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 RNA5SP415-201ENST00000517246 115 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 AC012640.2-201ENST00000561606 901 ntBASIC17.82■□□□□ 0.44
CACNA1EQ15878 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.82■□□□□ 0.44
CACNA1EQ15878 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CACNA1EQ15878 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 RPSAP43-201ENST00000402237 625 ntBASIC17.81■□□□□ 0.44
CACNA1EQ15878 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.81■□□□□ 0.44
CACNA1EQ15878 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 MIR149-201ENST00000384879 89 ntBASIC17.81■□□□□ 0.44
CACNA1EQ15878 RPS8P6-201ENST00000426177 609 ntBASIC17.81■□□□□ 0.44
CACNA1EQ15878 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 AC004967.1-201ENST00000453589 447 ntBASIC17.81■□□□□ 0.44
CACNA1EQ15878 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CACNA1EQ15878 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.81■□□□□ 0.44
CACNA1EQ15878 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC098831.1-202ENST00000438821 336 ntBASIC17.8■□□□□ 0.44
CACNA1EQ15878 AL591424.1-201ENST00000442569 1213 ntBASIC17.8■□□□□ 0.44
CACNA1EQ15878 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC116407.3-201ENST00000623905 1129 ntBASIC17.8■□□□□ 0.44
CACNA1EQ15878 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 SDHAP2-201ENST00000455183 2001 ntBASIC17.8■□□□□ 0.44
CACNA1EQ15878 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC004832.2-201ENST00000426397 482 ntBASIC17.8■□□□□ 0.44
CACNA1EQ15878 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.8■□□□□ 0.44
CACNA1EQ15878 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CACNA1EQ15878 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNA1EQ15878 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CACNA1EQ15878 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CACNA1EQ15878 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 AL049812.1-201ENST00000432563 2267 ntBASIC17.79■□□□□ 0.44
CACNA1EQ15878 HLA-J-201ENST00000462773 1622 ntBASIC17.79■□□□□ 0.44
CACNA1EQ15878 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.79■□□□□ 0.44
CACNA1EQ15878 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA1EQ15878 RCN1P2-201ENST00000398357 915 ntBASIC17.79■□□□□ 0.44
CACNA1EQ15878 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.79■□□□□ 0.44
CACNA1EQ15878 UPF3AP3-201ENST00000420996 769 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms