Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX4P78413 CA15P1-201ENST00000481698 905 ntBASIC19.09■□□□□ 0.65
IRX4P78413 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX4P78413 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX4P78413 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.09■□□□□ 0.65
IRX4P78413 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX4P78413 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.09■□□□□ 0.65
IRX4P78413 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX4P78413 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX4P78413 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
IRX4P78413 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
IRX4P78413 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
IRX4P78413 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
IRX4P78413 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
IRX4P78413 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX4P78413 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.08■□□□□ 0.65
IRX4P78413 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.08■□□□□ 0.65
IRX4P78413 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX4P78413 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
IRX4P78413 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX4P78413 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX4P78413 AP003041.3-201ENST00000527151 707 ntBASIC19.08■□□□□ 0.64
IRX4P78413 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.08■□□□□ 0.64
IRX4P78413 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.08■□□□□ 0.64
IRX4P78413 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.08■□□□□ 0.64
IRX4P78413 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IRX4P78413 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX4P78413 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.08■□□□□ 0.64
IRX4P78413 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX4P78413 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX4P78413 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX4P78413 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
IRX4P78413 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX4P78413 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.07■□□□□ 0.64
IRX4P78413 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.07■□□□□ 0.64
IRX4P78413 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.07■□□□□ 0.64
IRX4P78413 KRT8P45-201ENST00000414328 1447 ntBASIC19.07■□□□□ 0.64
IRX4P78413 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
IRX4P78413 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
IRX4P78413 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.07■□□□□ 0.64
IRX4P78413 IRX1P1-201ENST00000438849 1838 ntBASIC19.07■□□□□ 0.64
IRX4P78413 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IRX4P78413 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 AL031598.1-201ENST00000561511 1773 ntBASIC19.06■□□□□ 0.64
IRX4P78413 AC020916.1-201ENST00000587762 1774 ntBASIC19.06■□□□□ 0.64
IRX4P78413 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.06■□□□□ 0.64
IRX4P78413 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
IRX4P78413 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX4P78413 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX4P78413 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX4P78413 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 AC112907.2-201ENST00000448639 330 ntBASIC19.06■□□□□ 0.64
IRX4P78413 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.06■□□□□ 0.64
IRX4P78413 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms