Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 AC073592.3-201ENST00000625118 1834 ntBASIC17.21■□□□□ 0.35
SMSP52788 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.21■□□□□ 0.35
SMSP52788 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.21■□□□□ 0.35
SMSP52788 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SMSP52788 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMSP52788 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.21■□□□□ 0.35
SMSP52788 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMSP52788 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMSP52788 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
SMSP52788 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMSP52788 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMSP52788 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.2■□□□□ 0.34
SMSP52788 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 AC009947.2-201ENST00000444014 672 ntBASIC17.2■□□□□ 0.34
SMSP52788 AC008040.2-201ENST00000461049 708 ntBASIC17.2■□□□□ 0.34
SMSP52788 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 AC092338.2-201ENST00000568827 1415 ntBASIC17.2■□□□□ 0.34
SMSP52788 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMSP52788 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SMSP52788 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.2■□□□□ 0.34
SMSP52788 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMSP52788 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.19■□□□□ 0.34
SMSP52788 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.19■□□□□ 0.34
SMSP52788 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SMSP52788 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.19■□□□□ 0.34
SMSP52788 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SMSP52788 KRT126P-201ENST00000549467 1181 ntBASIC17.19■□□□□ 0.34
SMSP52788 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.19■□□□□ 0.34
SMSP52788 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.19■□□□□ 0.34
SMSP52788 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
SMSP52788 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMSP52788 PCDHB18P-201ENST00000524813 2368 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms