Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCFC1P51610 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCFC1P51610 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HCFC1P51610 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HCFC1P51610 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.95■□□□□ 0.14
HCFC1P51610 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 SCARNA2-201ENST00000458748 420 ntBASIC15.95■□□□□ 0.14
HCFC1P51610 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.95■□□□□ 0.14
HCFC1P51610 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.95■□□□□ 0.14
HCFC1P51610 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HCFC1P51610 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HCFC1P51610 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HCFC1P51610 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HCFC1P51610 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.95■□□□□ 0.14
HCFC1P51610 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 AL591684.3-201ENST00000605187 298 ntBASIC15.95■□□□□ 0.14
HCFC1P51610 AL138831.2-201ENST00000606564 490 ntBASIC15.95■□□□□ 0.14
HCFC1P51610 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.95■□□□□ 0.14
HCFC1P51610 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.95■□□□□ 0.14
HCFC1P51610 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HCFC1P51610 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.94■□□□□ 0.14
HCFC1P51610 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 HNRNPDP1-201ENST00000439535 754 ntBASIC15.94■□□□□ 0.14
HCFC1P51610 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.94■□□□□ 0.14
HCFC1P51610 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HCFC1P51610 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HCFC1P51610 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.94■□□□□ 0.14
HCFC1P51610 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HCFC1P51610 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HCFC1P51610 AC010327.4-202ENST00000591484 748 ntBASIC15.94■□□□□ 0.14
HCFC1P51610 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.94■□□□□ 0.14
HCFC1P51610 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.93■□□□□ 0.14
HCFC1P51610 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.93■□□□□ 0.14
HCFC1P51610 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HCFC1P51610 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HCFC1P51610 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
HCFC1P51610 AL032819.2-201ENST00000624543 2162 ntBASIC15.93■□□□□ 0.14
HCFC1P51610 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.93■□□□□ 0.14
HCFC1P51610 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HCFC1P51610 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HCFC1P51610 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.92■□□□□ 0.14
HCFC1P51610 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms