Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCA4P51532 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
SMARCA4P51532 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
SMARCA4P51532 SNAI3-AS1-205ENST00000568633 2096 ntBASIC32.7■■■□□ 2.82
SMARCA4P51532 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC32.69■■■□□ 2.82
SMARCA4P51532 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC32.69■■■□□ 2.82
SMARCA4P51532 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC32.69■■■□□ 2.82
SMARCA4P51532 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC32.69■■■□□ 2.82
SMARCA4P51532 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC32.69■■■□□ 2.82
SMARCA4P51532 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 LBH-203ENST00000404397 543 ntTSL 4 BASIC32.69■■■□□ 2.82
SMARCA4P51532 AC007967.3-201ENST00000434308 558 ntBASIC32.69■■■□□ 2.82
SMARCA4P51532 AC108751.1-201ENST00000490852 363 ntBASIC32.69■■■□□ 2.82
SMARCA4P51532 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
SMARCA4P51532 ADK-206ENST00000541550 2222 ntTSL 2 BASIC32.69■■■□□ 2.82
SMARCA4P51532 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCA4P51532 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC32.69■■■□□ 2.82
SMARCA4P51532 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA4P51532 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA4P51532 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC32.68■■■□□ 2.82
SMARCA4P51532 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA4P51532 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
SMARCA4P51532 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
SMARCA4P51532 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC32.68■■■□□ 2.82
SMARCA4P51532 MCCD1P2-201ENST00000423228 335 ntBASIC32.68■■■□□ 2.82
SMARCA4P51532 CYMP-203ENST00000474680 1263 ntBASIC32.68■■■□□ 2.82
SMARCA4P51532 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC32.68■■■□□ 2.82
SMARCA4P51532 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC32.68■■■□□ 2.82
SMARCA4P51532 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCA4P51532 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC32.67■■■□□ 2.82
SMARCA4P51532 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA4P51532 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
SMARCA4P51532 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA4P51532 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA4P51532 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC32.67■■■□□ 2.82
SMARCA4P51532 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC32.67■■■□□ 2.82
SMARCA4P51532 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
SMARCA4P51532 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCA4P51532 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC32.67■■■□□ 2.82
SMARCA4P51532 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 AC211486.1-202ENST00000416371 468 ntBASIC32.66■■■□□ 2.82
SMARCA4P51532 AC211476.1-201ENST00000503899 468 ntBASIC32.66■■■□□ 2.82
SMARCA4P51532 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA4P51532 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 LINC00602-201ENST00000629776 2065 ntBASIC32.66■■■□□ 2.82
SMARCA4P51532 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA4P51532 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC32.66■■■□□ 2.82
SMARCA4P51532 AC002310.6-201ENST00000624451 1377 ntBASIC32.66■■■□□ 2.82
SMARCA4P51532 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCA4P51532 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC32.66■■■□□ 2.82
SMARCA4P51532 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC32.66■■■□□ 2.82
SMARCA4P51532 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 AC099343.3-201ENST00000605834 2503 ntBASIC32.65■■■□□ 2.82
SMARCA4P51532 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC32.65■■■□□ 2.82
SMARCA4P51532 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCA4P51532 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 MYLKP1-201ENST00000509077 1580 ntBASIC32.65■■■□□ 2.82
SMARCA4P51532 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCA4P51532 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCA4P51532 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
SMARCA4P51532 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCA4P51532 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC32.65■■■□□ 2.82
SMARCA4P51532 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCA4P51532 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCA4P51532 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC32.64■■■□□ 2.82
SMARCA4P51532 SIGLEC16-201ENST00000599858 1437 ntBASIC32.64■■■□□ 2.82
SMARCA4P51532 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC32.64■■■□□ 2.82
SMARCA4P51532 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC32.64■■■□□ 2.82
SMARCA4P51532 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC32.64■■■□□ 2.82
SMARCA4P51532 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC32.64■■■□□ 2.82
SMARCA4P51532 BX005266.1-201ENST00000473402 457 ntBASIC32.64■■■□□ 2.82
SMARCA4P51532 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCA4P51532 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC32.64■■■□□ 2.82
SMARCA4P51532 RPS15-207ENST00000591032 550 ntTSL 3 BASIC32.64■■■□□ 2.82
SMARCA4P51532 MTDHP5-201ENST00000598980 586 ntBASIC32.64■■■□□ 2.82
SMARCA4P51532 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC32.64■■■□□ 2.82
SMARCA4P51532 AC079781.4-201ENST00000641908 219 ntBASIC32.64■■■□□ 2.82
SMARCA4P51532 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCA4P51532 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC32.64■■■□□ 2.82
SMARCA4P51532 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SMARCA4P51532 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC32.63■■■□□ 2.81
SMARCA4P51532 MSRA-206ENST00000521209 814 ntTSL 3 BASIC32.63■■■□□ 2.81
SMARCA4P51532 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC32.63■■■□□ 2.81
SMARCA4P51532 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms