Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.3■□□□□ 0.84
CPT1AP50416 AL671883.3-201ENST00000603274 991 ntBASIC20.3■□□□□ 0.84
CPT1AP50416 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.3■□□□□ 0.84
CPT1AP50416 AL355877.3-201ENST00000622820 899 ntBASIC20.3■□□□□ 0.84
CPT1AP50416 AC117500.6-201ENST00000624871 588 ntBASIC20.3■□□□□ 0.84
CPT1AP50416 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CPT1AP50416 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPT1AP50416 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CPT1AP50416 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.29■□□□□ 0.84
CPT1AP50416 AC073648.2-201ENST00000510116 352 ntBASIC20.29■□□□□ 0.84
CPT1AP50416 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPT1AP50416 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.29■□□□□ 0.84
CPT1AP50416 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPT1AP50416 AC099343.3-201ENST00000605834 2503 ntBASIC20.29■□□□□ 0.84
CPT1AP50416 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPT1AP50416 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.28■□□□□ 0.84
CPT1AP50416 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CPT1AP50416 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.28■□□□□ 0.84
CPT1AP50416 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.28■□□□□ 0.84
CPT1AP50416 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CPT1AP50416 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.28■□□□□ 0.84
CPT1AP50416 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.28■□□□□ 0.84
CPT1AP50416 MTCL1P1-201ENST00000446207 792 ntBASIC20.28■□□□□ 0.84
CPT1AP50416 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
CPT1AP50416 AC148477.8-201ENST00000624298 468 ntBASIC20.28■□□□□ 0.84
CPT1AP50416 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.28■□□□□ 0.84
CPT1AP50416 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPT1AP50416 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.27■□□□□ 0.84
CPT1AP50416 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
CPT1AP50416 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 MIR574-201ENST00000385209 96 ntBASIC20.27■□□□□ 0.84
CPT1AP50416 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.27■□□□□ 0.84
CPT1AP50416 AC018712.1-201ENST00000455767 687 ntBASIC20.27■□□□□ 0.84
CPT1AP50416 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 SCARNA2-201ENST00000458748 420 ntBASIC20.27■□□□□ 0.84
CPT1AP50416 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.27■□□□□ 0.84
CPT1AP50416 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.27■□□□□ 0.84
CPT1AP50416 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPT1AP50416 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CPT1AP50416 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CPT1AP50416 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPT1AP50416 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPT1AP50416 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.27■□□□□ 0.83
CPT1AP50416 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPT1AP50416 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CPT1AP50416 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPT1AP50416 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
CPT1AP50416 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.26■□□□□ 0.83
CPT1AP50416 FGFR3P6-201ENST00000457012 610 ntBASIC20.26■□□□□ 0.83
CPT1AP50416 RNPS1P1-201ENST00000507437 918 ntBASIC20.26■□□□□ 0.83
CPT1AP50416 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.26■□□□□ 0.83
CPT1AP50416 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.26■□□□□ 0.83
CPT1AP50416 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms