Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.48■□□□□ 0.71
PSEN1P49768 AC104390.1-201ENST00000555663 520 ntBASIC19.48■□□□□ 0.71
PSEN1P49768 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.48■□□□□ 0.71
PSEN1P49768 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PSEN1P49768 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.48■□□□□ 0.71
PSEN1P49768 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PSEN1P49768 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PSEN1P49768 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PSEN1P49768 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PSEN1P49768 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.47■□□□□ 0.71
PSEN1P49768 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PSEN1P49768 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.47■□□□□ 0.71
PSEN1P49768 MIR3180-4-201ENST00000582223 153 ntBASIC19.47■□□□□ 0.71
PSEN1P49768 AC060766.1-201ENST00000590824 627 ntBASIC19.47■□□□□ 0.71
PSEN1P49768 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.47■□□□□ 0.71
PSEN1P49768 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC19.47■□□□□ 0.71
PSEN1P49768 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PSEN1P49768 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PSEN1P49768 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 Z98044.1-201ENST00000632503 1764 ntBASIC19.47■□□□□ 0.71
PSEN1P49768 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.47■□□□□ 0.71
PSEN1P49768 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PSEN1P49768 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PSEN1P49768 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 AL031133.1-201ENST00000406807 723 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 AL671277.2-201ENST00000458060 996 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 RASA4DP-201ENST00000460726 1199 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 KRT18P41-201ENST00000518924 1277 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PSEN1P49768 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
PSEN1P49768 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 AC006333.2-201ENST00000607957 2099 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.46■□□□□ 0.71
PSEN1P49768 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PSEN1P49768 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PSEN1P49768 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 AL357033.4-201ENST00000617703 1807 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PSEN1P49768 MTMR9LP-203ENST00000426597 1545 ntBASIC19.46■□□□□ 0.71
PSEN1P49768 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PSEN1P49768 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PSEN1P49768 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PSEN1P49768 KRT18P38-201ENST00000449496 1282 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms