Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PRIM1P49642 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.8■■□□□ 1.4
PRIM1P49642 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.8■■□□□ 1.4
PRIM1P49642 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRIM1P49642 AL691403.2-201ENST00000618460 490 ntBASIC23.8■■□□□ 1.4
PRIM1P49642 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PRIM1P49642 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.8■■□□□ 1.4
PRIM1P49642 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.79■■□□□ 1.4
PRIM1P49642 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.79■■□□□ 1.4
PRIM1P49642 AC068472.1-201ENST00000474589 881 ntBASIC23.79■■□□□ 1.4
PRIM1P49642 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 IGHV3-22-201ENST00000520721 359 ntBASIC23.79■■□□□ 1.4
PRIM1P49642 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.79■■□□□ 1.4
PRIM1P49642 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.79■■□□□ 1.4
PRIM1P49642 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.79■■□□□ 1.4
PRIM1P49642 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.79■■□□□ 1.4
PRIM1P49642 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRIM1P49642 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PRIM1P49642 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PRIM1P49642 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.78■■□□□ 1.4
PRIM1P49642 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PRIM1P49642 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 AC104109.2-201ENST00000602919 1418 ntBASIC23.78■■□□□ 1.4
PRIM1P49642 AC141586.3-201ENST00000562166 1838 ntBASIC23.78■■□□□ 1.4
PRIM1P49642 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
PRIM1P49642 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRIM1P49642 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.78■■□□□ 1.4
PRIM1P49642 AC145285.3-201ENST00000564603 959 ntBASIC23.78■■□□□ 1.4
PRIM1P49642 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.78■■□□□ 1.4
PRIM1P49642 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PRIM1P49642 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRIM1P49642 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.78■■□□□ 1.4
PRIM1P49642 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.78■■□□□ 1.4
PRIM1P49642 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRIM1P49642 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PRIM1P49642 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
PRIM1P49642 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.77■■□□□ 1.4
PRIM1P49642 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 RPS2P28-201ENST00000314255 741 ntBASIC23.77■■□□□ 1.4
PRIM1P49642 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.77■■□□□ 1.4
PRIM1P49642 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.77■■□□□ 1.4
PRIM1P49642 AC021087.4-201ENST00000563761 564 ntBASIC23.77■■□□□ 1.4
PRIM1P49642 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.77■■□□□ 1.4
PRIM1P49642 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.77■■□□□ 1.4
PRIM1P49642 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.77■■□□□ 1.4
PRIM1P49642 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.77■■□□□ 1.4
PRIM1P49642 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PRIM1P49642 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PRIM1P49642 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRIM1P49642 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.76■■□□□ 1.39
PRIM1P49642 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PRIM1P49642 AC112777.1-201ENST00000540175 1423 ntBASIC23.76■■□□□ 1.39
PRIM1P49642 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PRIM1P49642 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PRIM1P49642 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PRIM1P49642 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.76■■□□□ 1.39
PRIM1P49642 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.76■■□□□ 1.39
PRIM1P49642 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.76■■□□□ 1.39
PRIM1P49642 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.76■■□□□ 1.39
PRIM1P49642 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms