Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.31■□□□□ 0.2
SRP9P49458 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.31■□□□□ 0.2
SRP9P49458 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.31■□□□□ 0.2
SRP9P49458 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.31■□□□□ 0.2
SRP9P49458 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SRP9P49458 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 RCC2P6-201ENST00000526625 1557 ntBASIC16.3■□□□□ 0.2
SRP9P49458 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.3■□□□□ 0.2
SRP9P49458 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.3■□□□□ 0.2
SRP9P49458 AC116562.2-201ENST00000507042 360 ntBASIC16.3■□□□□ 0.2
SRP9P49458 AP003071.4-201ENST00000562276 1284 ntBASIC16.3■□□□□ 0.2
SRP9P49458 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SRP9P49458 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.3■□□□□ 0.2
SRP9P49458 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.3■□□□□ 0.2
SRP9P49458 AC011298.2-201ENST00000617989 482 ntBASIC16.3■□□□□ 0.2
SRP9P49458 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRP9P49458 AC080080.1-201ENST00000625121 2420 ntBASIC16.3■□□□□ 0.2
SRP9P49458 AC124067.4-201ENST00000519691 2379 ntBASIC16.3■□□□□ 0.2
SRP9P49458 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 AL162741.1-201ENST00000565563 1558 ntBASIC16.3■□□□□ 0.2
SRP9P49458 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP9P49458 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP9P49458 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.29■□□□□ 0.2
SRP9P49458 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 AC084018.2-201ENST00000613093 2607 ntBASIC16.29■□□□□ 0.2
SRP9P49458 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SRP9P49458 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 TSPY21P-201ENST00000433481 731 ntBASIC16.29■□□□□ 0.2
SRP9P49458 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.29■□□□□ 0.2
SRP9P49458 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.29■□□□□ 0.2
SRP9P49458 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SRP9P49458 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 GNAS-203ENST00000306120 1878 ntBASIC16.29■□□□□ 0.2
SRP9P49458 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.29■□□□□ 0.2
SRP9P49458 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SRP9P49458 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRP9P49458 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
SRP9P49458 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRP9P49458 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.28■□□□□ 0.2
SRP9P49458 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
SRP9P49458 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.28■□□□□ 0.2
SRP9P49458 FAM207BP-201ENST00000447172 505 ntBASIC16.28■□□□□ 0.2
SRP9P49458 B3GAT3P1-201ENST00000471720 806 ntBASIC16.28■□□□□ 0.2
SRP9P49458 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SRP9P49458 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.28■□□□□ 0.2
SRP9P49458 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.28■□□□□ 0.2
SRP9P49458 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms